STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI48886.1Ribose transport system ATP-binding protein. (508 aa)    
Predicted Functional Partners:
SHI48865.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.999
SHI48907.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.999
SHI48931.1
Hypothetical protein.
       0.648
SHI97837.1
Transcriptional regulator, LacI family.
 
 
 0.618
SHJ04665.1
Transcriptional regulator, LacI family.
 
 
 0.618
SHI31715.1
Transcriptional regulator, LacI family.
 
 
 0.560
SHI77018.1
Transcriptional regulator, LacI family.
 
 
 0.540
SHI77626.1
Fructokinase.
 
  
 0.428
SHI78747.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
    
  0.418
SHI48950.1
NUDIX domain-containing protein.
       0.404
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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