STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI66790.1phenylacetate-CoA ligase. (435 aa)    
Predicted Functional Partners:
SHI66822.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.837
SHI37315.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.807
SHI38008.1
Protein involved in gliding motility EpsB.
 
  
  0.798
SHI38028.1
Protein involved in gliding motility EpsA.
  
  
  0.772
SHI64105.1
Hypothetical protein.
  
     0.764
SHI37342.1
O-antigen ligase like membrane protein.
 
     0.753
SHI89364.1
Protein involved in gliding motility RemB.
  
     0.748
SHI65937.1
Tetratricopeptide repeat-containing protein.
  
     0.746
SHI79204.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.739
SHI42036.1
Tetratricopeptide repeat-containing protein.
  
     0.734
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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