STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI66921.1Glycosyltransferase involved in cell wall bisynthesis. (376 aa)    
Predicted Functional Partners:
SHI66992.1
O-antigen ligase like membrane protein.
 
 
  0.931
SHI67041.1
UDP-galactopyranose mutase.
  
 
  0.858
SHI66842.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
    0.846
SHI66887.1
UDPglucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.830
SHI66870.1
dTDP-glucose 4,6-dehydratase.
 
 
  0.820
SHI66941.1
O-Antigen ligase.
  
 
  0.794
SHI66968.1
Hypothetical protein.
  
 
  0.794
SHI67074.1
Sulfotransferase domain-containing protein.
   
   0.790
SHI67024.1
Glycosyltransferase, GT2 family.
  
    0.775
SHJ16477.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.731
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.