STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI60623.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
SHI60646.1
LPS export ABC transporter protein LptC.
 
     0.830
SHI60668.1
Tetratricopeptide repeat-containing protein.
       0.796
SHI60594.1
Hemolysin, contains CBS domains.
       0.773
SHI39219.1
Hypothetical protein.
  
     0.603
SHI33908.1
Acyl-CoA-binding protein.
  
     0.583
SHI60569.1
Peptidylprolyl isomerase.
       0.569
SHI47467.1
RteC protein.
  
     0.566
coaX
Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.527
SHI47524.1
Hypothetical protein.
  
     0.523
SHI50806.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.