STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI79402.1ZIP Zinc transporter. (221 aa)    
Predicted Functional Partners:
SHI79424.1
Protein of unknown function.
       0.799
SHI79038.1
Cell division protein ZapA.
  
     0.768
SHI53983.1
Hypothetical protein.
  
     0.666
SHI79388.1
Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
 
     0.658
SHI90402.1
Arginase family enzyme; Belongs to the arginase family.
  
     0.642
SHI53558.1
Hypothetical protein.
  
     0.639
SHJ05033.1
Protein of unknown function.
  
     0.622
SHI68962.1
Transcription elongation factor, GreA/GreB, C-term.
  
    0.579
SHJ17368.1
Hypothetical protein.
  
     0.577
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.553
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.