STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI84766.1TonB-dependent Receptor Plug Domain. (814 aa)    
Predicted Functional Partners:
SHI84792.1
Protein of unknown function.
 
     0.949
SHI32761.1
WD40-like Beta Propeller Repeat.
  
 
 
 0.720
SHJ06426.1
Outer membrane protein OmpA.
  
 
 
 0.692
SHJ16818.1
Outer membrane transport energization protein TonB.
  
 
   0.616
SHI89343.1
Protein TonB.
  
 
   0.588
SHJ05751.1
TonB protein C-terminal.
  
 
   0.572
SHI52486.1
Membrane protein YfhO.
  
     0.557
SHJ04455.1
AsmA family protein.
  
     0.551
SHJ08832.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.550
SHI84817.1
Hypothetical protein.
       0.543
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.