STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI98831.1Cell division protein FtsB. (107 aa)    
Predicted Functional Partners:
SHJ11954.1
Cell division protein FtsQ.
 
 
 
 0.999
SHI98802.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
       0.810
SHI98849.1
Uridine kinase.
       0.774
SHI90402.1
Arginase family enzyme; Belongs to the arginase family.
  
     0.693
SHI79038.1
Cell division protein ZapA.
  
   
 0.677
SHI98778.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
       0.665
SHI75621.1
Protein of unknown function.
 
     0.657
SHI60646.1
LPS export ABC transporter protein LptC.
 
 
 
 0.647
SHJ20839.1
Protein of unknown function.
  
     0.643
SHI75822.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.617
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.