STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ11790.1BlaR1 peptidase M56. (654 aa)    
Predicted Functional Partners:
SHJ11764.1
Predicted transcriptional regulator.
 
 
 0.995
SHI42475.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
  
  
 
0.913
SHI42504.1
Predicted transcriptional regulator.
 
 
 0.889
SHJ11806.1
Protein of unknown function.
       0.501
SHJ11740.1
cation:H+ antiporter.
       0.481
SHJ12561.1
Transglutaminase-like superfamily protein.
  
     0.450
SHJ05585.1
Hypothetical protein.
  
     0.439
SHI54784.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.