STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ09371.1Protein of unknown function. (427 aa)    
Predicted Functional Partners:
SHJ09350.1
Phage shock protein C (PspC) family protein.
       0.785
SHJ09403.1
Lysophospholipase L1.
       0.773
SHJ09331.1
Voltage-gated potassium channel.
       0.771
SHJ09285.1
DNA uptake protein ComE.
 
     0.723
SHJ16551.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
      0.525
SHI83180.1
DNA processing protein.
 
     0.485
SHI96402.1
OstA-like protein.
  
     0.482
SHI53027.1
Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains.
  
     0.458
SHJ09422.1
Cystathionine beta-synthase.
       0.448
SHJ05218.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
  
     0.432
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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