STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ08691.1Protein of unknown function. (244 aa)    
Predicted Functional Partners:
SHI88176.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.772
SHI87997.1
Aspartyl protease.
  
     0.769
SHI47833.1
Family of unknown function.
  
     0.766
SHI50806.1
Hypothetical protein.
  
     0.760
SHI76204.1
CarboxypepD_reg-like domain-containing protein.
  
     0.759
SHI66722.1
Hypothetical protein.
  
     0.758
SHI32375.1
Hypothetical protein.
  
     0.757
SHI42416.1
Hypothetical protein.
  
     0.755
SHJ08717.1
Hypothetical protein.
  
     0.749
SHI79058.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.