STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ10760.1Outer membrane protein beta-barrel domain-containing protein. (441 aa)    
Predicted Functional Partners:
SHI34075.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.903
SHJ10727.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
    0.777
SHJ10697.1
Hypothetical protein.
       0.773
SHI63417.1
Hypothetical protein.
  
     0.652
SHI40670.1
Hypothetical protein.
  
     0.573
SHI76455.1
Hypothetical protein.
  
     0.518
SHJ10786.1
RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.490
SHI50610.1
Hypothetical protein.
  
     0.489
SHI78957.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
  
  0.488
SHI40298.1
Hypothetical protein.
  
     0.483
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.