STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ16551.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (202 aa)    
Predicted Functional Partners:
SHJ16527.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  0.991
SHI42587.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.961
SHI42618.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  0.898
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.758
SHJ16501.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.688
SHI49469.1
Cysteine synthase A.
  
  0.652
SHI52672.1
Cystathionine beta-synthase.
  
  0.652
SHI74477.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  0.652
SHJ09422.1
Cystathionine beta-synthase.
  
  0.652
SHJ16254.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.636
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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