STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ19948.1Ribosomal protein S18 acetylase RimI. (171 aa)    
Predicted Functional Partners:
SHJ19929.1
Hypothetical protein.
       0.773
SHJ19968.1
Hypothetical protein.
       0.572
SHJ19995.1
Hypothetical protein.
       0.564
SHJ19863.1
Hypothetical protein.
 
     0.489
SHI74810.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
 
   0.456
SHJ19904.1
Protein of unknown function.
       0.448
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.410
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.