STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ21272.1Peptide/nickel transport system permease protein. (373 aa)    
Predicted Functional Partners:
SHI83565.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
SHJ05262.1
Peptide/nickel transport system permease protein.
 
 0.999
SHI53763.1
Peptide/nickel transport system substrate-binding protein.
 0.962
SHI49234.1
Putative ABC transport system ATP-binding protein.
 
 
    0.887
SHJ21290.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
    0.809
SHI89556.1
Putative ABC transport system ATP-binding protein.
 
 
    0.724
SHJ17174.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
      0.702
SHJ21245.1
Histidine triad (HIT) family protein.
       0.655
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
    0.650
SHI39315.1
Protein of unknown function.
  
 
 0.552
Your Current Organism:
Mesonia phycicola
NCBI taxonomy Id: 579105
Other names: DSM 21425, KCTC 22373, M. phycicola, Mesonia phycicola Kang and Lee 2010, Mesonia sp. MDSW-25, strain MDSW-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.