Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACX71887.1PFAM: Protein of unknown function DUF1621; KEGG: mja:MJ0919 hypothetical protein. (153 aa)    
Predicted Functional Partners:
ACX71888.1
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: mja:MJ0920 GTP-binding protein homologue (YphC).
       0.792
ACX71889.1
TIGRFAM: methanogenesis marker protein 11; PFAM: domain of unknown function DUF1743; KEGG: mja:MJ0921 hypothetical protein.
       0.660
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: mja:MJ0918 indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (TrpC); Belongs to the TrpC family.
       0.651
ACX72395.1
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mja:MJ0922 hypothetical protein.
       0.631
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.617
ACX71885.1
biotin/acetyl-CoA-carboxylase ligase; KEGG: mja:MJ1619 biotin operon repressor/biotin--[acetyl-CoA-carboxylase] ligase (BirA); TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein.
       0.535
psmA
Proteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
    0.502
ACX72331.1
KEGG: mja:MJ0530 hypothetical protein; TIGRFAM: ZPR1-like zinc finger protein; ZPR1-related zinc finger protein; PFAM: ZPR1-type Zinc finger domain protein; SMART: ZPR1-type Zinc finger domain protein.
       0.481
ACX72757.1
PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: mja:MJ1432 hypothetical protein.
       0.481
ACX73447.1
PFAM: Ribosome maturation protein SBDS-like; KEGG: mja:MJ0592 putative RNA-associated protein.
       0.478
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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