STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX71904.1PFAM: Type II secretion system F domain; KEGG: mfe:Mefer_1025 type II secretion system F domain protein. (344 aa)    
Predicted Functional Partners:
ACX71905.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ0779 hypothetical protein.
  
  
 0.995
ACX71903.1
PFAM: type II secretion system protein E; SMART: Hedgehog/intein hint domain protein; KEGG: mja:MJ0781 type II secretion system protein.
  
  
 0.936
tfb
Transcription factor TFIIB cyclin-releated protein; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
       0.718
ACX71970.1
PFAM: type II secretion system protein E; KEGG: mja:MJ0900 type II secretion system protein.
  
  
 0.598
ACX72371.1
PFAM: type II secretion system protein E; KEGG: mfe:Mefer_0090 type II secretion system protein E.
  
  
 0.598
ACX71901.1
KEGG: mfe:Mefer_1022 hypothetical protein.
       0.514
ACX72002.1
PFAM: Protein of unknown function DUF515; KEGG: mja:MJ0835 hypothetical protein.
     
 0.507
ACX72047.1
PFAM: putative RNA methylase; THUMP domain protein; KEGG: mja:MJ0438 hypothetical protein.
       0.481
ACX72370.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ1286 hypothetical protein.
       0.481
ACX73242.1
PFAM: GTP-binding protein HSR1-related; KEGG: mja:MJ1464 GTP-binding protein.
       0.481
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.