STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX71922.1PFAM: Protein of unknown function DUF555; KEGG: mfe:Mefer_0415 protein of unknown function DUF555; Belongs to the UPF0212 family. (116 aa)    
Predicted Functional Partners:
ACX72161.1
PFAM: Protein of unknown function DUF357; KEGG: mfe:Mefer_0888 protein of unknown function DUF357.
 
     0.641
ACX73393.1
PFAM: phosphoesterase RecJ domain protein; RNA binding S1 domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mja:MJ1198 hypothetical protein.
  
     0.640
ef1b
Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
    0.596
ACX72687.1
PFAM: PfkB domain protein; KEGG: mja:MJ0406 ribokinase (RbsK); Belongs to the carbohydrate kinase PfkB family.
       0.594
ACX72608.1
TIGRFAM: ATP binding protein; PFAM: protein of unknown function DUF71 ATP-binding region; KEGG: mja:MJ0570 hypothetical protein.
       0.586
dphB
Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
       0.583
ACX72407.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ1545 hypothetical protein.
  
     0.571
ACX72278.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfe:Mefer_0598 DEAD/DEAH box helicase domain protein.
  
     0.522
ACX73548.1
PFAM: RIO-like kinase; RIO2 kinase, winged helix domain protein; SMART: protein of unknown function RIO1; KEGG: mfe:Mefer_0509 non-specific serine/threonine protein kinase.
  
     0.520
ACX73025.1
PFAM: amino acid-binding ACT domain protein; KEGG: mja:MJ1601 hypothetical protein.
  
     0.508
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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