STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX71954.1PFAM: AMMECR1 domain protein; KEGG: mja:MJ0810 hypothetical protein. (201 aa)    
Predicted Functional Partners:
ACX73287.1
PFAM: protein of unknown function DUF52; KEGG: mja:MJ0403 hypothetical protein; Belongs to the MEMO1 family.
    0.991
ACX72483.1
PFAM: Radical SAM domain protein; KEGG: mja:MJ0808 pyruvate-formate-lyase-activating enzyme (act).
     0.970
ACX72033.1
PFAM: protein of unknown function DUF77; KEGG: mja:MJ1052 hypothetical protein.
  
    0.622
ACX72166.1
PFAM: Protein of unknown function DUF373; KEGG: mja:MJ1032 hypothetical protein.
       0.594
ACX73226.1
PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: mja:MJ0133 hypothetical protein.
       0.594
pyrC
Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
       0.594
pgk
PFAM: phosphoglycerate kinase; KEGG: mja:MJ0641 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.589
ACX73172.1
TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; KEGG: mfe:Mefer_1374 acetyl coenzyme A synthetase (ADP forming), alpha domain protein.
       0.578
ACX73030.1
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mja:MJ0996 hypothetical protein.
       0.576
ACX73221.1
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: mfe:Mefer_1287 fibronectin-binding A domain protein.
 
   
 0.564
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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