STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX71973.1KEGG: mfe:Mefer_1203 hypothetical protein. (854 aa)    
Predicted Functional Partners:
ACX71975.1
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: mja:MJ0906 hypothetical protein.
     
 0.968
ACX71974.1
PFAM: Protein of unknown function DUF1495; KEGG: mja:MJ0905 hypothetical protein.
     
 0.954
ACX71972.1
PFAM: Peptidase A24B, FlaK domain protein; peptidase A24A prepilin type IV; KEGG: mja:MJ0902 hypothetical protein.
       0.758
ACX72123.1
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfe:Mefer_0642 CheW protein.
   
    0.684
ACX71970.1
PFAM: type II secretion system protein E; KEGG: mja:MJ0900 type II secretion system protein.
  
    0.663
ACX71968.1
PFAM: flagellin; KEGG: mja:MJ0898 flagella-related protein G, putative.
  
    0.623
ACX71971.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ0901 flagellar assembly protein J.
  
  
 0.588
ACX71967.1
PFAM: flagellin; KEGG: mja:MJ0897 hypothetical protein.
  
    0.571
ACX71969.1
SMART: AAA ATPase; KEGG: mja:MJ0899 flagellar accessory protein FlaH.
  
    0.507
ACX72371.1
PFAM: type II secretion system protein E; KEGG: mfe:Mefer_0090 type II secretion system protein E.
   
    0.483
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.