STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX71985.1KEGG: mfe:Mefer_0062 hypothetical protein. (52 aa)    
Predicted Functional Partners:
ACX71981.1
KEGG: mfe:Mefer_0060 hypothetical protein.
       0.916
ACX71984.1
KEGG: mja:MJ0913 pantothenate metabolism flavoprotein (dfp); TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein.
       0.916
ACX71982.1
KEGG: sul:SYO3AOP1_0489 hypothetical protein.
       0.773
ACX71983.1
KEGG: ter:Tery_4266 ATPase-like protein.
       0.773
ACX71986.1
KEGG: mja:MJ0816 hypothetical protein.
       0.773
asd
Phosphatidylserine decarboxylase related protein; Catalyzes the formation of archaetidylethanolamine (PtdEtn) from archaetidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.
       0.773
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
       0.648
ACX71988.1
PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mja:MJ0818 hypothetical protein.
       0.536
ACX71989.1
TIGRFAM: S-layer protein; PFAM: S-layer family protein; KEGG: mfe:Mefer_0912 S-layer protein.
       0.402
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.