STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72004.1PFAM: Peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mja:MJ0835.2 hypothetical protein. (340 aa)    
Predicted Functional Partners:
ACX72005.1
PFAM: cysteine-rich small domain; KEGG: mja:MJ0836 hypothetical protein.
       0.965
ACX72003.1
PFAM: Protein of unknown function DUF361; KEGG: mja:MJ0835.1 hypothetical protein.
  
    0.790
ACX72001.1
KEGG: mja:MJ0833 hypothetical protein.
       0.763
ACX72000.1
PFAM: Protein of unknown function DUF361; KEGG: mja:MJ0832.1 hypothetical protein.
       0.721
ACX72002.1
PFAM: Protein of unknown function DUF515; KEGG: mja:MJ0835 hypothetical protein.
       0.642
ACX72280.1
KEGG: mja:MJ1399 hypothetical protein; Belongs to the UPF0200 family.
  
  
 0.522
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
  
 0.493
aroD
3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
  
  
 0.493
ACX72912.1
PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfe:Mefer_0285 chromosome segregation and condensation protein ScpA.
   
    0.459
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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