Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACX72033.1PFAM: protein of unknown function DUF77; KEGG: mja:MJ1052 hypothetical protein. (97 aa)    
Predicted Functional Partners:
ACX73310.1
PFAM: Carbamoyltransferase; KEGG: mja:MJ1051 nodulation protein.
       0.713
ACX72953.1
PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; SMART: phosphoesterase PA-phosphatase related; KEGG: mja:MJ0374 lipoprotein B (LppB).
       0.654
ACX71954.1
PFAM: AMMECR1 domain protein; KEGG: mja:MJ0810 hypothetical protein.
  
    0.622
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
       0.594
ACX73226.1
PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: mja:MJ0133 hypothetical protein.
       0.589
ACX72166.1
PFAM: Protein of unknown function DUF373; KEGG: mja:MJ1032 hypothetical protein.
       0.578
ACX72032.1
KEGG: mja:MJ1053 hypothetical protein.
       0.492
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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