STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACX72050.1TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: mja:MJ0442 hydrogenase expression/formation protein (HypB). (224 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.988
ACX72244.1
TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mja:MJ0993 hydrogenase expression/formation protein (HypD).
 
  
 0.970
ACX73479.1
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mja:MJ0200 hydrogenase expression/formation protein (HypC).
 
  
 0.949
ACX73375.1
PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: mja:MJ0255 hypothetical protein.
  
    0.887
ACX73408.1
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: mja:MJ0713 hydrogenase expression regulatory protein (HypF).
 
   
 0.886
ACX72051.1
KH domain protein; KEGG: mja:MJ0443 putative RNA-processing protein; TIGRFAM: KH domain protein; PFAM: K Homology, type 1, subgroup; SMART: KH domain protein.
       0.771
ACX72928.1
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: mja:MJ0676 hydrogenase expression/formation protein (HypE).
 
  
 0.753
ACX71992.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mja:MJ0825 peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (SlyD).
    
 
 0.736
ACX73247.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mja:MJ0278 peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (SlyD).
    
 
 0.736
ACX72347.1
KEGG: mja:MJ0515 carbon monoxide dehydrogenase, hydrogenase subunit CooH (CooH); Belongs to the complex I 49 kDa subunit family.
   
 
 0.733
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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