STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72108.1KEGG: mfe:Mefer_0146 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components. (378 aa)    
Predicted Functional Partners:
ACX72680.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mja:MJ0413 nitrate transporter protein (NrtB) homolog (CmpB).
 
 0.999
ACX72681.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfe:Mefer_1307 ABC transporter related.
 
 0.999
ACX72940.1
PFAM: nitrogen regulatory protein P-II; protein of unknown function DUF970; KEGG: mae:Maeo_1433 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.688
ACX72941.1
PFAM: nitrogen regulatory protein P-II; KEGG: mae:Maeo_1432 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.688
ACX72955.1
PFAM: nitrogen regulatory protein P-II; KEGG: mja:MJ0059 nitrogen regulatory protein P-II (GlnB); Belongs to the P(II) protein family.
   
 
 0.688
ACX73575.1
PFAM: nitrogen regulatory protein P-II; KEGG: mja:MJ0059 nitrogen regulatory protein P-II (GlnB); Belongs to the P(II) protein family.
   
 
 0.688
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
  
  
 0.648
ACX73160.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mja:MJ0621 hypothetical protein.
       0.555
ACX72107.1
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mfe:Mefer_0143 agmatinase; Belongs to the arginase family.
     
 0.500
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.491
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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