STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72179.1PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: mja:MJ0799 phosphoribosylformylglycinamidine cyclo-ligase isolog (PurM). (297 aa)    
Predicted Functional Partners:
ACX72180.1
KEGG: mja:MJ0798 hypothetical protein.
       0.773
ACX72181.1
Hypothetical protein.
       0.757
ACX72182.1
PFAM: protein of unknown function DUF214; KEGG: mja:MJ0797 hypothetical protein.
       0.714
ACX72183.1
KEGG: mja:MJ0796.1 hypothetical protein.
       0.688
ACX72184.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ0796 ABC transporter, ATP-binding protein.
       0.688
ACX72185.1
PFAM: Protein of unknown function DUF2143; KEGG: mae:Maeo_0531 hypothetical protein.
       0.651
ACX72178.1
TIGRFAM: methanogenesis marker protein 15; CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: mfe:Mefer_1002 methanogenesis marker protein 15.
       0.526
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec); Belongs to the class-II aminoacyl-tRNA synthetase family. Type-2 seryl-tRNA synthetase subfamily.
 
   
 0.497
ACX73272.1
PFAM: AIG2 family protein; KEGG: mja:MJ0434 hypothetical protein.
  
     0.481
ACX72782.1
PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: mja:MJ0664 hypothetical protein.
  
     0.464
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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