STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72182.1PFAM: protein of unknown function DUF214; KEGG: mja:MJ0797 hypothetical protein. (367 aa)    
Predicted Functional Partners:
ACX72184.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ0796 ABC transporter, ATP-binding protein.
 
 0.998
ACX72995.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1508 ABC transporter ATP-binding protein.
 
 0.992
ACX72681.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfe:Mefer_1307 ABC transporter related.
      0.858
rad50
SMC domain protein; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex; Belongs to the SMC family. RAD50 subfamily.
  
 
 0.801
ACX72183.1
KEGG: mja:MJ0796.1 hypothetical protein.
       0.748
ACX72180.1
KEGG: mja:MJ0798 hypothetical protein.
  
   0.741
ACX73177.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1572 cobalt transport ATP-binding protein (CbiO).
      0.736
ACX72185.1
PFAM: Protein of unknown function DUF2143; KEGG: mae:Maeo_0531 hypothetical protein.
       0.728
ACX72181.1
Hypothetical protein.
       0.723
ACX72179.1
PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: mja:MJ0799 phosphoribosylformylglycinamidine cyclo-ligase isolog (PurM).
       0.714
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.