STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72206.1PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ0103 hypothetical protein. (433 aa)    
Predicted Functional Partners:
ACX71955.1
KEGG: mja:MJ0885 DNA polymerase B1; PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; Hedgehog/intein hint domain protein.
  
    0.678
ACX72987.1
KEGG: mja:MJ1362 NADH ubiquinone oxidoreductase, subunit 1 isolog.
       0.581
ACX72205.1
TIGRFAM: DNA helicase; SMART: DEAD-like helicase; KEGG: mja:MJ0104 DNA-binding protein.
       0.551
ACX72772.1
PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: mja:MJ1474 hypothetical protein.
  
    0.531
ACX72704.1
PFAM: THUMP domain protein; KEGG: mja:MJ0421 hypothetical protein.
  
     0.482
ACX72679.1
PFAM: ATP dependent DNA ligase; KEGG: mja:MJ0414 hypothetical protein.
  
    0.475
ACX73444.1
Brix domain protein; Probably involved in the biogenesis of the ribosome.
  
     0.450
ACX73400.1
TIGRFAM: phosphoesterase; PFAM: metallophosphoesterase; KEGG: mja:MJ0037 hypothetical protein.
 
   
 0.447
ACX73027.1
KEGG: mja:MJ1599 hypothetical protein.
 
     0.426
ACX72005.1
PFAM: cysteine-rich small domain; KEGG: mja:MJ0836 hypothetical protein.
  
     0.411
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.