STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72211.1PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mja:MJ0687 hypothetical protein. (335 aa)    
Predicted Functional Partners:
rad50
SMC domain protein; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex; Belongs to the SMC family. RAD50 subfamily.
 
 
 
 0.804
ACX72284.1
PFAM: legume lectin beta domain; KEGG: mja:MJ1396 hypothetical protein.
  
     0.732
ACX72184.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ0796 ABC transporter, ATP-binding protein.
   
 
 0.728
ACX72995.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1508 ABC transporter ATP-binding protein.
   
 
 0.728
ACX72281.1
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: mja:MJ1398 hypothetical protein.
 
     0.666
ACX72370.1
PFAM: Type II secretion system F domain; KEGG: mja:MJ1286 hypothetical protein.
  
     0.657
ACX73360.1
PFAM: Protein of unknown function DUF2341; KEGG: mja:MJ1470 hypothetical protein.
  
     0.657
ACX72170.1
PFAM: zinc/iron permease; KEGG: mja:MJ1036 hypothetical protein.
 
     0.622
ACX72275.1
PFAM: protein of unknown function DUF505; KEGG: mja:MJ1355 hypothetical protein.
  
     0.615
ACX72769.1
Transcriptional regulator, TrmB; PFAM: domain of unknown function DUF1745; transcriptional regulator TrmB; KEGG: mja:MJ1623 hypothetical protein.
 
     0.594
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.