STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72285.1KEGG: mae:Maeo_1065 hypothetical protein. (243 aa)    
Predicted Functional Partners:
ACX72283.1
KEGG: mja:MJ1397 hypothetical protein.
       0.595
ACX72286.1
KEGG: mja:MJ1394 hypothetical protein.
       0.557
ACX72281.1
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: mja:MJ1398 hypothetical protein.
       0.535
ACX72282.1
KEGG: mae:Maeo_1062 hypothetical protein.
       0.533
ACX72284.1
PFAM: legume lectin beta domain; KEGG: mja:MJ1396 hypothetical protein.
       0.516
ACX72287.1
KEGG: mja:MJ1393 hypothetical protein.
       0.436
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.