STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72300.1PFAM: Carboxymuconolactone decarboxylase; KEGG: mja:MJ0742 hypothetical protein. (104 aa)    
Predicted Functional Partners:
ACX72299.1
Superoxide reductase; PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: mja:MJ0741 desulfoferrodoxin, putative (rbo).
  
  
 0.992
ACX72297.1
PFAM: Hypothetical protein MTH865; KEGG: mja:MJ0738 hypothetical protein.
  
    0.975
ACX72296.1
KEGG: mja:MJ0737 rubredoxin-like non-heme iron protein.
  
  
 0.967
ACX72302.1
TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: mja:MJ0744 heterodisulfide reductase, subunit C (HdrC).
  
    0.937
ACX72292.1
KEGG: mja:MJ0733 hypothetical protein.
  
    0.932
ACX72295.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.757
ACX72301.1
KEGG: mja:MJ0743 heterodisulfide reductase, subunit B1 (hdrB1); TIGRFAM: CoB/CoM heterodisulfide reductase, subunit B; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein.
  
    0.724
ACX73552.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ1302 ferredoxin.
 
    0.717
ACX73600.1
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: mja:MJ0929 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.686
ACX72394.1
TIGRFAM: methanogenesis marker protein 6; PFAM: conserved hypothetical protein; KEGG: mja:MJ0498 hypothetical protein.
 
     0.627
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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