STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72319.1PFAM: peptidase M50; KEGG: mfe:Mefer_0219 peptidase M50. (191 aa)    
Predicted Functional Partners:
ACX72318.1
PFAM: Rhomboid family protein; KEGG: mja:MJ0610.1 GlpG-related protein.
       0.844
taw2
Protein of unknown function Met10; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7- aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe).
       0.746
ACX72953.1
PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; SMART: phosphoesterase PA-phosphatase related; KEGG: mja:MJ0374 lipoprotein B (LppB).
     
 0.631
ACX72912.1
PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfe:Mefer_0285 chromosome segregation and condensation protein ScpA.
       0.610
ACX72507.1
TIGRFAM: TraB family protein; PFAM: TraB determinant protein; KEGG: mja:MJ1365 pheromone shutdown protein (TraB).
       0.594
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.594
ACX73329.1
PFAM: peptidase M50; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mja:MJ0392 hypothetical protein; Belongs to the peptidase M50B family.
 
   
 0.594
purM
TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: mja:MJ0203 phosphoribosylaminoimidazole synthetase.
       0.592
ACX72317.1
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family.
       0.559
ACX73294.1
TIGRFAM: methanogenesis marker protein 1; PFAM: protein of unknown function DUF181; KEGG: mja:MJ1094 hypothetical protein.
 
     0.556
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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