STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX72323.1PFAM: Radical SAM domain protein; KEGG: dae:Dtox_0480 radical SAM domain protein. (281 aa)    
Predicted Functional Partners:
ACX72322.1
Hypothetical protein.
       0.804
ACX72321.1
SMART: Tetratricopeptide repeat; KEGG: similar to nephrocystin 3.
       0.536
ACX72324.1
Hypothetical protein.
       0.525
ACX72205.1
TIGRFAM: DNA helicase; SMART: DEAD-like helicase; KEGG: mja:MJ0104 DNA-binding protein.
 
    0.495
ACX73011.1
PFAM: peptidase U32; KEGG: mfe:Mefer_0733 peptidase U32.
 
  
 0.428
ACX72172.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ0804 pyruvate formate-lyase activating enzyme (act).
 
     0.420
ACX73310.1
PFAM: Carbamoyltransferase; KEGG: mja:MJ1051 nodulation protein.
 
  
 0.418
ACX73317.1
KEGG: mae:Maeo_0723 extracellular solute-binding protein.
 
  
 0.413
ACX72590.1
KEGG: mja:MJ1374 hypothetical protein.
  
  
 0.411
ACX73371.1
PFAM: extracellular solute-binding protein family 1; KEGG: mja:MJ1186 molybdate ABC transporter periplasmic substrate-binding protein.
 
  
 0.410
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.