STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72347.1KEGG: mja:MJ0515 carbon monoxide dehydrogenase, hydrogenase subunit CooH (CooH); Belongs to the complex I 49 kDa subunit family. (376 aa)    
Predicted Functional Partners:
ACX72346.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: mja:MJ0516 carbon monoxide dehydrogenase, hydrogenase subunit CooL (CooL).
 
 0.999
ACX72342.1
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: mja:MJ0520 NADH-ubiquinone oxidoreductase, subunit 1.
 
 
 0.981
ACX72986.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: mja:MJ1363 formate hydrogenlyase, subunit 7.
 
 
 0.973
ACX73557.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mja:MJ1309 hydrogenase subunit F.
 
 
 0.966
ACX73555.1
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: mja:MJ1307 putative monovalent cation/H+ antiporter subunit B.
   
   0.958
ACX72345.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, EhaM; KEGG: mfe:Mefer_0331 (NiFe)-hydrogenase-3-type complex Eha, EhaM.
  
    0.910
ACX72344.1
PFAM: Protein of unknown function DUF2104, membrane; KEGG: mfe:Mefer_0330 protein of unknown function DUF2104, membrane.
     
 0.905
ACX72987.1
KEGG: mja:MJ1362 NADH ubiquinone oxidoreductase, subunit 1 isolog.
  
 
 0.879
ACX73552.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ1302 ferredoxin.
  
 
 0.857
ACX72340.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaH, predicted; KEGG: mja:MJ0522 NADH dehydrogenase I.
     
 0.846
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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