STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72400.1PFAM: Dimethylmenaquinone methyltransferase; KEGG: mja:MJ0644 S-adenosylmethionine:2-demethylmenaquinone methyltransferase (MenG). (196 aa)    
Predicted Functional Partners:
ACX73412.1
KEGG: mja:MJ0680 pentose-5-phosphate-3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase.
    
  0.912
ACX72255.1
TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: mja:MJ1247 hypothetical protein.
    
  0.911
fae-hps
Formaldehyde-activating enzyme (Fae); Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family.
     
 0.908
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 
  0.903
ACX72399.1
PFAM: protein of unknown function DUF125 transmembrane; KEGG: mja:MJ0645 hypothetical protein.
       0.868
ACX72401.1
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mfe:Mefer_0258 porphobilinogen synthase; Belongs to the ALAD family.
       0.693
ACX72398.1
PFAM: Protein of unknown function DUF2115; KEGG: mja:MJ0646 hypothetical protein; Belongs to the UPF0305 family.
       0.653
ACX72116.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mfe:Mefer_1401 DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family.
   
 
 0.652
flpA
Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
   
 
 0.652
ACX72402.1
PFAM: periplasmic binding protein; KEGG: mja:MJ0642 hypothetical protein.
       0.535
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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