STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72404.1TIGRFAM: methanogenesis marker protein 2; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mja:MJ0640 hypothetical protein. (324 aa)    
Predicted Functional Partners:
pgk
PFAM: phosphoglycerate kinase; KEGG: mja:MJ0641 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.833
ACX72587.1
TIGRFAM: methanogen marker protein 4; KEGG: mfe:Mefer_0014 methanogen marker protein 4.
 
     0.711
ACX73293.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ1093 NifB protein (NifB).
 
     0.643
ACX73551.1
PFAM: conserved hypothetical protein; KEGG: mja:MJ0065 hypothetical protein.
 
     0.614
ACX73162.1
KEGG: mja:MJ0639 hypothetical protein.
       0.582
ACX72623.1
TIGRFAM: methanogenesis marker protein 3; KEGG: mja:MJ1412 hypothetical protein; Belongs to the UPF0288 family.
 
     0.574
ACX73163.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mja:MJ0638 hypothetical protein.
       0.570
ACX73373.1
PFAM: protein of unknown function DUF366; KEGG: mfe:Mefer_1005 protein of unknown function DUF366.
 
     0.463
ACX72689.1
TIGRFAM: methanogenesis marker protein 5; PFAM: conserved hypothetical protein; KEGG: mfe:Mefer_1315 methanogenesis marker protein 5.
 
     0.445
rfcL
AAA ATPase central domain protein; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily.
 
     0.437
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.