STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72438.1KEGG: mmx:MmarC6_0089 hypothetical protein. (272 aa)    
Predicted Functional Partners:
ACX72437.1
KEGG: mmx:MmarC6_0088 hypothetical protein.
       0.773
ACX72436.1
KEGG: mmx:MmarC6_0087 hypothetical protein.
       0.768
ACX72433.1
Hypothetical protein.
       0.767
ACX72434.1
Hypothetical protein.
       0.767
ACX72435.1
KEGG: mmx:MmarC6_0086 hypothetical protein.
       0.762
ACX72431.1
Hypothetical protein.
       0.755
ACX72432.1
Hypothetical protein.
       0.755
ACX72439.1
KEGG: mfe:Mefer_1547 hypothetical protein.
       0.585
ACX72430.1
TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; KEGG: mmx:MmarC6_0079 TP901 family phage tail tape measure protein.
       0.508
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.