STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX72458.1KEGG: mmx:MmarC6_0045 hypothetical protein. (71 aa)    
Predicted Functional Partners:
ACX72613.1
PFAM: nucleoside recognition domain protein; KEGG: mfe:Mefer_1137 nucleoside recognition domain protein.
   
    0.966
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
   
    0.942
ACX72705.1
PFAM: Protein of unknown function DUF70; KEGG: mfe:Mefer_1299 protein of unknown function DUF70.
   
    0.803
ACX72461.1
KEGG: mfe:Mefer_1581 hypothetical protein.
  
    0.795
ACX72462.1
PFAM: integrase family protein; KEGG: mja:MJ0367 integrase/recombinase.
  
    0.792
ACX72459.1
Hypothetical protein.
       0.773
ACX72460.1
Hypothetical protein.
       0.773
ACX72818.1
KEGG: mja:MJ0027 hypothetical protein.
   
    0.644
ACX73106.1
PFAM: protein of unknown function DUF95 transmembrane; KEGG: mja:MJ0096 hypothetical protein.
   
    0.643
ACX73070.1
PFAM: protein of unknown function DUF752; KEGG: mja:MJ0670 hypothetical protein.
   
    0.491
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.