STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72475.1PFAM: ABC-2 type transporter; KEGG: mja:MJ1024 hypothetical protein. (397 aa)    
Predicted Functional Partners:
ACX72476.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1023 ABC transporter ATP-binding protein.
 
  
 0.979
ACX72474.1
PFAM: Xanthine/uracil/vitamin C permease; KEGG: mja:MJ0326 hypothetical protein.
       0.512
ACX72478.1
KEGG: mja:MJ1021 hypothetical protein.
       0.496
ACX72477.1
PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: mja:MJ1022 queuine tRNA-ribosyltransferase.
       0.463
ACX73294.1
TIGRFAM: methanogenesis marker protein 1; PFAM: protein of unknown function DUF181; KEGG: mja:MJ1094 hypothetical protein.
  
  
 0.450
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.