STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72476.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1023 ABC transporter ATP-binding protein. (264 aa)    
Predicted Functional Partners:
ACX72475.1
PFAM: ABC-2 type transporter; KEGG: mja:MJ1024 hypothetical protein.
 
  
 0.979
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
 
   0.700
ACX72731.1
KEGG: mja:MJ1226 plasma membrane ATPase 1 (aha1); TIGRFAM: plasma-membrane proton-efflux P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein.
  
 0.692
ACX73465.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: mja:MJ0221 V-type ATP synthase subunit K; Belongs to the V-ATPase proteolipid subunit family.
  
 0.676
ACX71980.1
PFAM: metallophosphoesterase; KEGG: mja:MJ0912 hypothetical protein.
   
 
 0.618
ACX72205.1
TIGRFAM: DNA helicase; SMART: DEAD-like helicase; KEGG: mja:MJ0104 DNA-binding protein.
   
 
 0.618
rad50
SMC domain protein; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex; Belongs to the SMC family. RAD50 subfamily.
  
  
 0.596
ACX72184.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ0796 ABC transporter, ATP-binding protein.
  
0.583
ACX72861.1
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; Tetratricopeptide repeat; KEGG: tga:TGAM_0974 serine/threonine protein kinase.
  
 
 0.559
ACX72538.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1268 high-affinity branched-chain amino acid transport ATP-binding protein (BraG).
     
0.553
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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