STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72591.1PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: mja:MJ1375 SpoVB isolog. (413 aa)    
Predicted Functional Partners:
ACX72062.1
KEGG: mfe:Mefer_0500 hypothetical protein.
  
    0.888
ACX72705.1
PFAM: Protein of unknown function DUF70; KEGG: mfe:Mefer_1299 protein of unknown function DUF70.
   
    0.825
ACX71930.1
Nucleotide sugar dehydrogenase; KEGG: mja:MJ1054 UDP-glucose dehydrogenase, putative; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SMART: Hedgehog/intein hint domain protein.
  
  
 0.822
ACX72592.1
TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: mja:MJ0552 cobalamin biosynthesis protein (CbiJ).
 
     0.775
ACX72031.1
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: mja:MJ1116 asparagine synthetase (AsnB).
  
  
 0.681
rlmE
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
       0.666
ACX72248.1
PFAM: glycosyl transferase group 1; KEGG: mfe:Mefer_0149 glycosyl transferase group 1.
 
  
 0.661
ACX72641.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1607 LPS biosynthesis protein, putative.
 
  
 0.620
ACX71942.1
PFAM: glycosyl transferase group 1; KEGG: mth:MTH173 LPS biosynthesis RfbU related protein.
 
  
 0.606
ACX71939.1
PFAM: glycosyl transferase group 1; KEGG: rci:LRC551 putative glycosyltransferase (group 1).
 
  
 0.592
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.