STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACX72638.1Alpha-amylase; PFAM: glycoside hydrolase family 57; polysaccharide deacetylase; KEGG: mja:MJ1611 alpha-amylase (AmyA). (465 aa)    
Predicted Functional Partners:
ACX73266.1
TIGRFAM: alpha-glucan phosphorylase; KEGG: mfe:Mefer_1323 alpha-glucan phosphorylase.
 
 
 0.962
ACX72639.1
TIGRFAM: oligosaccharide amylase; PFAM: glycoside hydrolase 15-related; KEGG: mja:MJ1610 glucoamylase (cga).
 
  
 0.929
apgM
Phosphonopyruvate decarboxylase-related protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.923
ACX72640.1
PFAM: Protein of unknown function DUF2582; KEGG: mja:MJ1608 hypothetical protein.
       0.772
ACX72641.1
PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1607 LPS biosynthesis protein, putative.
 
  
 0.720
ACX72642.1
Starch synthase; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: mja:MJ1606 glycogen synthase (GlgA).
  
  
 0.684
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: mja:MJ1605 glucose-6-phosphate isomerase; Belongs to the GPI family.
 
    0.530
ACX73545.1
KEGG: mfe:Mefer_1042 putative cytoplasmic protein.
  
    0.479
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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