STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72664.1Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: mja:MJ1254 hypothetical protein. (452 aa)    
Predicted Functional Partners:
ACX72668.1
PFAM: THUMP domain protein; KEGG: mfe:Mefer_0032 THUMP domain protein.
 
     0.899
secF
SecD/SecF/SecDF export membrane protein; Involved in protein export.
 
     0.839
ACX72666.1
PFAM: Glycosyltransferase 28 domain; KEGG: mja:MJ1255 hypothetical protein.
 
    0.784
ACX72665.1
Hypothetical protein.
       0.773
ACX73360.1
PFAM: Protein of unknown function DUF2341; KEGG: mja:MJ1470 hypothetical protein.
  
     0.690
ACX72284.1
PFAM: legume lectin beta domain; KEGG: mja:MJ1396 hypothetical protein.
  
     0.656
ACX72311.1
PFAM: putative cell wall binding repeat 2-containing protein; KEGG: mja:MJ0755 N-acetylmuramoyl-L-alanine amidase.
 
     0.621
cofD
LPPG domain protein containing protein; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
  
    0.618
ACX72110.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
  
     0.617
ACX72782.1
PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: mja:MJ0664 hypothetical protein.
  
     0.607
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.