STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72782.1PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: mja:MJ0664 hypothetical protein. (289 aa)    
Predicted Functional Partners:
ACX72781.1
PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mja:MJ0663 acetolactate synthase large subunit (IlvB); Belongs to the TPP enzyme family.
 
  
 0.933
ACX72769.1
Transcriptional regulator, TrmB; PFAM: domain of unknown function DUF1745; transcriptional regulator TrmB; KEGG: mja:MJ1623 hypothetical protein.
 
    0.865
ACX73487.1
PFAM: RNA polymerase insert; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: mja:MJ0192 DNA-directed RNA polymerase, subunit D (RpoD).
  
 
 0.847
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: mja:MJ0633 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.836
ACX73375.1
PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: mja:MJ0255 hypothetical protein.
  
    0.824
ACX71910.1
Transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; regulatory protein MarR; ATPase; SMART: regulatory protein ArsR; KEGG: mja:MJ0774 hypothetical protein.
 
   
 0.766
ACX73039.1
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mfe:Mefer_0100 thiamine pyrophosphate protein domain protein TPP-binding.
  
    0.742
ACX73374.1
KEGG: mja:MJ0255a sulfopyruvate decarboxylase subunit ComD.
  
    0.742
ACX73387.1
DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 
 0.728
ACX73388.1
DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.710
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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