STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX72786.1PFAM: regulatory protein LysR; KEGG: mfe:Mefer_0298 transcriptional regulator, LysR family. (289 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
     
 0.881
ACX72789.1
KEGG: mfe:Mefer_0301 GTP:adenosylcobinamide-phosphate guanylyltransferase-like protein.
 
     0.735
ACX72776.1
PFAM: PhoU family protein; KEGG: mfe:Mefer_1330 phosphate uptake regulator, PhoU.
 
  
 0.719
ACX72788.1
PFAM: PRC-barrel domain protein; KEGG: mja:MJ1118 hypothetical protein.
       0.701
ACX73022.1
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: mja:MJ1123 hypothetical protein.
       0.684
ACX73503.1
TIGRFAM: pyridoxal phosphate enzyme; KEGG: mja:MJ0158 selenocystein synthase (SelA).
 
   
 0.684
ACX72110.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: mja:MJ1525 putative transmembrane oligosaccharyl transferase.
 
     0.676
ACX72165.1
PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: mja:MJ0138 cobyrinic acid a,c-diamide synthase.
 
    0.653
ACX71910.1
Transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; regulatory protein MarR; ATPase; SMART: regulatory protein ArsR; KEGG: mja:MJ0774 hypothetical protein.
 
  
 0.652
ACX72693.1
PFAM: Mur ligase middle domain protein; KEGG: mfe:Mefer_0369 Mur ligase middle domain protein.
 
  
 0.642
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.