STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72800.1Flavodoxin; KEGG: mja:MJ0298 flavodoxin. (151 aa)    
Predicted Functional Partners:
ACX73351.1
PFAM: CheC domain protein; KEGG: mfe:Mefer_1109 CheC, inhibitor of MCP methylation.
   
   0.589
ACX73352.1
PFAM: CheC domain protein; KEGG: mfe:Mefer_1108 CheC, inhibitor of MCP methylation.
   
   0.589
ACX72799.1
PFAM: protein of unknown function DUF364; KEGG: mja:MJ0500 hypothetical protein.
  
    0.561
ACX73545.1
KEGG: mfe:Mefer_1042 putative cytoplasmic protein.
 
   
 0.456
ACX72833.1
PFAM: periplasmic binding protein; KEGG: mja:MJ0085 iron transport periplasmic binding protein, putative (CeuE).
  
  
 0.433
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
   0.409
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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