STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX72847.1Cellulase; PFAM: peptidase M42 family protein; peptidase M20; KEGG: mja:MJ0555 endoglucanase (CelM). (350 aa)    
Predicted Functional Partners:
ACX72055.1
PFAM: Auxin Efflux Carrier; KEGG: mja:MJ1031 hypothetical protein.
     
 0.631
ACX72031.1
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: mja:MJ1116 asparagine synthetase (AsnB).
  
  
 0.611
ACX73413.1
PFAM: Transketolase domain protein; KEGG: mja:MJ0681 transketolase'.
     
 0.600
ACX72002.1
PFAM: Protein of unknown function DUF515; KEGG: mja:MJ0835 hypothetical protein.
      
 0.585
ACX72003.1
PFAM: Protein of unknown function DUF361; KEGG: mja:MJ0835.1 hypothetical protein.
      
 0.585
ACX72585.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mja:MJ1368 sulfate transport system permease protein (CysT).
      
 0.582
ACX72814.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1367 sulfate transport ATP-binding protein (CysA).
      
 0.582
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
     
 0.568
ACX72485.1
PFAM: peptidase M24; creatinase; KEGG: mja:MJ0806 X-Pro aminopeptidase (PepQ).
 
  
 0.516
ACX72209.1
PFAM: aminotransferase class I and II; KEGG: mja:MJ0684 aspartate aminotransferase (aspB2).
  
 
 0.496
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.