Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX72852.1KEGG: tga:TGAM_0987 hypothetical protein. (586 aa)    
Predicted Functional Partners:
ACX72853.1
KEGG: tga:TGAM_0988 hypothetical protein.
       0.901
ACX72851.1
KEGG: tga:TGAM_0984 hypothetical protein.
       0.843
ACX72850.1
PFAM: ATPase; SMART: AAA ATPase; KEGG: mfe:Mefer_0506 ATPase.
       0.606
ACX72849.1
PFAM: PEGA domain protein; Protein of unknown function DUF2341; KEGG: tga:TGAM_0982 hypothetical protein, S-layer-like related.
       0.590
ACX72215.1
PFAM: DNA-binding TFAR19-related protein; KEGG: mfe:Mefer_0610 DNA-binding TFAR19-related protein; Belongs to the PDCD5 family.
  
     0.476
ACX72848.1
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: tga:TGAM_0974 serine/threonine protein kinase.
       0.475
ACX72854.1
Hypothetical protein; KEGG: bcq:BCQ_1005 tellurium resistance protein, putative.
       0.475
ACX72513.1
TIGRFAM: L-seryl-tRNA(Sec) kinase; PFAM: Chromatin associated protein KTI12; KEGG: mfe:Mefer_1539 L-seryl-tRNA(sec) kinase.
  
     0.452
rpl29
TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: mja:MJ0462 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
     0.444
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
  
     0.433
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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