Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACX72302.1 | ACX72961.1 | Metvu_0443 | Metvu_1103 | TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: mja:MJ0744 heterodisulfide reductase, subunit C (HdrC). | PFAM: Protein of unknown function DUF473; KEGG: mja:MJ0105 hypothetical protein. | 0.773 |
ACX72302.1 | ACX72962.1 | Metvu_0443 | Metvu_1104 | TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: mja:MJ0744 heterodisulfide reductase, subunit C (HdrC). | PFAM: protein of unknown function DUF75; KEGG: mfe:Mefer_0348 protein of unknown function DUF75. | 0.967 |
ACX72961.1 | ACX72302.1 | Metvu_1103 | Metvu_0443 | PFAM: Protein of unknown function DUF473; KEGG: mja:MJ0105 hypothetical protein. | TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: mja:MJ0744 heterodisulfide reductase, subunit C (HdrC). | 0.773 |
ACX72961.1 | ACX72962.1 | Metvu_1103 | Metvu_1104 | PFAM: Protein of unknown function DUF473; KEGG: mja:MJ0105 hypothetical protein. | PFAM: protein of unknown function DUF75; KEGG: mfe:Mefer_0348 protein of unknown function DUF75. | 0.993 |
ACX72962.1 | ACX72302.1 | Metvu_1104 | Metvu_0443 | PFAM: protein of unknown function DUF75; KEGG: mfe:Mefer_0348 protein of unknown function DUF75. | TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: mja:MJ0744 heterodisulfide reductase, subunit C (HdrC). | 0.967 |
ACX72962.1 | ACX72961.1 | Metvu_1104 | Metvu_1103 | PFAM: protein of unknown function DUF75; KEGG: mfe:Mefer_0348 protein of unknown function DUF75. | PFAM: Protein of unknown function DUF473; KEGG: mja:MJ0105 hypothetical protein. | 0.993 |