STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX73148.1PFAM: AIG2 family protein; KEGG: mfe:Mefer_0280 protein of unknown function DUF324. (148 aa)    
Predicted Functional Partners:
ACX73149.1
PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0280 protein of unknown function DUF324.
 
     0.799
ACX73146.1
PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0277 protein of unknown function DUF324.
 
     0.776
ACX73145.1
TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0276 protein of unknown function DUF324.
       0.746
ACX73147.1
TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: mfe:Mefer_0279 CRISPR-associated protein, Csx11 family.
       0.746
ACX73150.1
KEGG: mfe:Mefer_0281 hypothetical protein.
 
     0.694
ACX73151.1
PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0282 protein of unknown function DUF324.
 
     0.694
ACX73144.1
PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: tna:CTN_1587 helicase domain protein.
       0.486
ACX73143.1
KEGG: pab:PAB0590 hypothetical protein.
       0.444
tgtA
Archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
 
     0.405
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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