STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACX73175.1KEGG: mja:MJ1570 hypothetical protein. (115 aa)    
Predicted Functional Partners:
ACX73174.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mja:MJ1569 cobalt transport protein CbiM.
 
 
 0.997
ACX73176.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mja:MJ1571 cobalt transport protein (CbiQ).
 
 
 0.993
ACX73177.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mja:MJ1572 cobalt transport ATP-binding protein (CbiO).
 
 
 0.966
ACX72566.1
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: mfe:Mefer_0555 formylmethanofuran dehydrogenase subunit E region.
  
    0.844
ACX72564.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: mja:MJ1144 cobalamin biosynthesis protein (CbiG).
  
  
 0.608
ACX73510.1
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: mja:MJ0165 hypothetical protein.
  
    0.573
ACX71996.1
PFAM: PP-loop domain protein; KEGG: mja:MJ0830 hypothetical protein.
  
    0.559
ACX72602.1
PFAM: protein of unknown function DUF111; KEGG: mja:MJ1387 hypothetical protein; Belongs to the LarC family.
  
    0.528
cbiX
Cobalamin (vitamin B12) biosynthesis CbiX protein; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin.
  
  
 0.464
ACX72029.1
PFAM: protein of unknown function DUF75; KEGG: mja:MJ1210 hypothetical protein.
       0.451
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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